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SeqDesk · interactive

Score your facility against FAIR

FAIR is not Open, and it is not free — but most of it is cheaper than facilities think. Drag the sliders to describe your practice and watch the four FAIR dimensions move against the whole-archive ENA baseline. The lesson hides in the gap: depositing already makes data Findable and Accessible, but Interoperable and Reusable depend on contextual MIxS metadata — and that is where the public archive, and most facilities, fall short.

100%FAIR score0%50%100%

Global ENA baseline: 80% (grey tick). You are +20 points above it.

Every percentage is the share of your samples that meet a criterion — a countable number, not a vague “fields filled”. The FAIR score is the average of the four dimensions below.

Samples deposited to a public archive100%
Drives Findable + Accessible — an accession in an open archive.
Samples on a real MIxS package100%
Drives Interoperable — a checklist that actually demands fields, not “Generic”.
Samples with geography + collection date100%
Drives Reusable — where and when each sample was taken (the universal context).
Global ENA average is measured whole-archive; a typical small lab is illustrative (deposits, but skips most metadata). Or pick a real center below.
Compare to a real center
Measured from each center’s public ENA samples · see the full league table.
F · Findable (persistent accession)
you 100%baseline 99%
A · Accessible (in an open archive)
you 100%baseline 99%
I · Interoperable (real MIxS package, not “Generic”)
you 100%baseline 66%
R · Reusable (geography + collection date)
you 100%baseline 57%

Depositing already buys the world Findable and Accessible almost for free — that part is solved. The archive collapses on Interoperable and Reusable, the MIxS metadata. Capturing it once, at the bench, is what moves a facility from the 80% baseline to 100%.

Findable / AccessibleDepositing into the ENA mints a persistent accession in an open, indexed archive — effectively universal once a sample is submitted (~99%)
InteroperableShare of public ENA samples on a real MIxS package, not the permissive “Generic” default — ~66%
ReusableUniversal sample context — geographic location + collection date — about 57%. (A MIxS environment is rarer still, ~13%, but only applies to environmental samples, so it is left out of the cross-facility score.)
Real centersThe “compare to a real center” presets are measured per facility from public ENA samples — see the facility league table
ComputationEntirely in your browser — nothing is sent anywhere; the sliders are illustrative inputs, not a measurement of your instance

A companion to the metadata-completeness, reporting-standard and facility league-table analyses — the same archive baselines, made tangible. · back to all research data