Changelog
Track what’s new in each SeqDesk release.
The full changelog is maintained on GitHub alongside the source code:
Recent Highlights
v1.1.x — Current Release
- Pipeline system with manifest-driven architecture
- MAG pipeline integration (nf-core/mag v3.0.0)
- Read-cleaning pipeline (nf-core/detaxizer) — screens raw/unknown reads for host/contaminant sequences and stages cleaned reads for admin review
- SubMG pipeline for automated ENA submission
- MetaxPath pipeline for long-read clinical metagenomics
- Real-time pipeline monitoring with DAG visualization
- Automatic update system with backup and rollback
- Form builder for customizable order and study forms
- MIxS metadata support with checklist templates
- Sequencing technology registry (Illumina, ONT, PacBio)
- Department-based access control
- Excel import/export for sample data
- Support ticket system
Staying Up to Date
SeqDesk includes a built-in update system. Check for updates from the admin panel or configure automatic updates.